RBM6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RBM6 mutation is significantly associated with the RNA expression of many other genes, with 3,279 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RBM6-associated genes across cancer lineages are VPS26A, ACOT9, and DCTN4. Each is linked with RBM6 in more than 2 cancer types. Because this analysis shows association rather than direction, both RBM6-to-partner and partner-to-RBM6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VPS26A grouped by RBM6-low versus RBM6-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBM6→partner) and Y-score (partner→RBM6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECVPS26A →+0.417+2.210.008.00133
UCECACOT9 →+0.324+3.201.005<.00133
UCECDCTN4 →+0.344+2.052.001.00433
UCECCCDC43 →+0.446+2.606<.001<.00133
UCECPRC1 →+0.676+2.279<.001<.00133
UCECFOXD2-AS1 →+0.654+4.180<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,279 associations by consensus.

VPS26A by RBM6 expression — UCEC

Box plot of VPS26A in RBM6-low vs RBM6-high samples in UCEC.

Explore this box plot interactively →

Exploration