RBM42

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RBM42 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,733 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RBM42-associated proteins across cancer lineages are TBCB, SAE1, and NCAPH. Each is linked with RBM42 in more than 4 cancer types. Because this analysis shows association rather than direction, both RBM42-to-partner and partner-to-RBM42 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RBM42 versus TBCB in OV, with a Pearson correlation of 0.52.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RBM42→partner) and Y-score (partner→RBM42) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVTBCB →+0.414+0.635<.001<.00135
GBMSAE1 →+0.429+0.436<.001<.00134
LSCCNCAPH →+0.457+0.618.002<.00134
LUADSPCS2 →-0.460-0.390<.001.00134
LSCCTBCB_S31 →+0.709+0.691<.001<.00133
OVPEPD →+0.474+0.675<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,733 associations by consensus.

RBM42 vs TBCB — OV

Per-sample scatter of RBM42 vs TBCB in OV (Pearson r = 0.52).

Explore this scatter interactively →

Exploration