RBM39

Across TCGA patient cohorts, RBM39 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,506 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RBM39-associated proteins across cancer lineages are RPRD1B, TAF4, and ADNP. Each is linked with RBM39 in more than 8 cancer types. Because this analysis shows association rather than direction, both RBM39-to-partner and partner-to-RBM39 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RBM39 versus RPRD1B in GBM, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RBM39→partner) and Y-score (partner→RBM39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RPRD1B →	+0.510	+0.558	<.001	<.001	3	9
GBM	TAF4 →	+0.308	+0.451	<.001	<.001	3	7
GBM	ADNP →	+0.334	+0.429	<.001	<.001	3	7
LSCC	PRPF4B →	+0.210	+0.331	<.001	<.001	3	6
GBM	RAD21 →	+0.221	+0.370	<.001	<.001	3	6
GBM	RBM12 →	+0.268	+0.359	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,506 associations by consensus.

RBM39 vs RPRD1B — GBM

Explore this scatter interactively →