RBM38

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RBM38 mutation is significantly associated with the total protein of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RBM38-associated genes across cancer lineages are NF2, Annexin-1, and ERK2. Each is linked with RBM38 in more than 1 cancer types. Because this analysis shows association rather than direction, both RBM38-to-partner and partner-to-RBM38 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NF2 grouped by RBM38-low versus RBM38-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBM38→partner) and Y-score (partner→RBM38) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNF2 →+0.370+3.000.001.03631
UCECAnnexin-1 →+0.823+3.169.004.02031
UCECERK2 →+0.299+3.000.004.03621
UCECARID1A →-0.367-3.162<.001.01911
UCECCyclin-B1 →+0.811+3.169.008.02011
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

NF2 by RBM38 expression — UCEC

Box plot of NF2 in RBM38-low vs RBM38-high samples in UCEC.

Explore this box plot interactively →

Exploration