RBM12B-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RBM12B-AS1 RNA differs between tumor and matched normal tissue in 17 of 18 cancer types tested, making tumor–normal expression one of RBM12B-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where RBM12B-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types RBM12B-AS1 is over-expressed in tumor, although a few such as THCA show the opposite, repressed pattern.

HNSC, BLCA, and LUAD are the cancer types where RBM12B-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RBM12B-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCMaleIV+0.738<.00112view →
BLCAAllAll+0.866<.0019view →
LUADMaleAll+0.865<.0019view →
KIRCAllAll+0.256<.0019view →
STADMaleII,III,IV+1.048<.0018view →
UCECAllAll+0.622.0038view →
LIHCAllAll+0.305<.0018view →
COADFemaleII,III,IV+0.732<.0017view →
LUSCFemaleAll+0.994<.0016view →
BRCAAllII,III,IV+0.665<.0016view →
KIRPMaleIII,IV+0.467.0076view →
THCAAllII,III,IV−0.499.0015view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 17 lineages.

RBM12B-AS1–HNSC

Tumor-vs-normal expression box plot for RBM12B-AS1 RNA in HNSC.

Open the HNSC breakdown →

Exploration