RBBP9

Across TCGA patient cohorts, RBBP9 protein abundance is significantly associated with the RNA expression of many other genes, with 13,181 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RBBP9-associated genes across cancer lineages are CDS2, ATRN, and PTPRA. Each is linked with RBBP9 in more than 7 cancer types. Because this analysis shows association rather than direction, both RBBP9-to-partner and partner-to-RBBP9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RBBP9 versus CDS2 in LSCC, with a Pearson correlation of 0.47.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBBP9→partner) and Y-score (partner→RBBP9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	CDS2 →	+0.597	+0.328	<.001	<.001	3	8
LSCC	ATRN →	+0.541	+0.287	.003	<.001	2	8
COAD	PTPRA →	+0.532	+0.390	<.001	.001	3	7
OV	UBOX5 →	+0.617	+0.445	.001	.003	3	6
BRCA	GCNT1P1 →	+0.480	+0.312	<.001	.003	2	7
OV	CRNKL1 →	+0.540	+0.387	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,181 associations by consensus.

RBBP9 vs CDS2 — LSCC

Explore this scatter interactively →