RBBP4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RBBP4 mutation is significantly associated with the RNA expression of many other genes, with 2,750 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RBBP4-associated genes across cancer lineages are RNA5SP422, RNA5SP70, and RNA5SP414. Each is linked with RBBP4 in more than 2 cancer types. Because this analysis shows association rather than direction, both RBBP4-to-partner and partner-to-RBBP4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP422 grouped by RBBP4-low versus RBBP4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBBP4→partner) and Y-score (partner→RBBP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP422 →+0.986+2.323<.001<.00133
BRCARNA5SP70 →+0.458+6.731<.001<.00133
UCECRNA5SP414 →+0.655+2.670<.001<.00133
UCECRNA5SP412 →+0.703+2.619<.001<.00133
CESCLINC02563 →+0.630+4.757<.001.00432
CESCNIFKP1 →+0.051+3.975.007.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,750 associations by consensus.

RNA5SP422 by RBBP4 expression — UCEC

Box plot of RNA5SP422 in RBBP4-low vs RBBP4-high samples in UCEC.

Explore this box plot interactively →

Exploration