RAVER1

Across TCGA patient cohorts, RAVER1 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,694 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RAVER1-associated proteins across cancer lineages are CDC37, DNMT1, and UBAP2L_S609. Each is linked with RAVER1 in more than 4 cancer types. Because this analysis shows association rather than direction, both RAVER1-to-partner and partner-to-RAVER1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAVER1 versus CDC37 in BRCA, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RAVER1→partner) and Y-score (partner→RAVER1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	CDC37 →	+0.200	+0.615	.001	<.001	3	5
GBM	DNMT1 →	+0.355	+0.477	<.001	<.001	3	5
UCEC	UBAP2L_S609 →	+0.430	+0.452	<.001	.006	3	4
GBM	NABP2 →	+0.412	+0.561	<.001	<.001	3	4
LSCC	PIK3R4_S853 →	-0.606	-0.529	<.001	<.001	3	4
LSCC	PRPF4B_S294 →	+0.714	+0.512	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,694 associations by consensus.

RAVER1 vs CDC37 — BRCA

Explore this scatter interactively →