RARG

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RARG RNA expression is significantly associated with the protein abundance of many other proteins, with 14,256 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RARG-associated proteins across cancer lineages are MYG1, TMED5, and CLPTM1L. Each is linked with RARG in more than 5 cancer types. Because this analysis shows association rather than direction, both RARG-to-partner and partner-to-RARG results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RARG versus MYG1 in OV, with a Pearson correlation of 0.19.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RARG→partner) and Y-score (partner→RARG) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVMYG1 →+0.287+0.460.001.00936
UCECTMED5 →-0.463-0.888.005.00135
PDACCLPTM1L →-0.321-0.311.001.00635
GBMAHNAK_T490 →+0.540+0.313.002.00335
GBMPPL →+0.635+0.343<.001<.00135
COADHSPB1 →+0.673+0.529<.001.00235
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,256 associations by consensus.

RARG vs MYG1 — OV

Per-sample scatter of RARG vs MYG1 in OV (Pearson r = 0.19).

Explore this scatter interactively →

Exploration