RAPSN

Across TCGA cell cohorts, RAPSN RNA expression is significantly associated with the go_rna of many other GO terms, with 2,095 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible RAPSN-associated GO terms across cancer lineages are Regulation of stress fiber assembly, Positive regulation of autophagy, and Cellular response to type I interferon. Each is linked with RAPSN in more than 6 cancer types. Because this analysis shows association rather than direction, both RAPSN-to-partner and partner-to-RAPSN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of stress fiber assembly grouped by RAPSN-low versus RAPSN-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RAPSN→partner) and Y-score (partner→RAPSN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OVARY	Regulation of stress fiber assembly →	+0.052	+0.122	.001	.002	3	6
OVARY	Positive regulation of autophagy →	+0.038	+0.114	.001	.006	3	6
LUNG_NSCLC_LUSC	Cellular response to type I interferon →	+0.111	+0.184	.003	.005	2	7
BLOOD_Leukemia	Regulation of defense response to virus →	+0.033	+0.090	.007	.005	3	6
LARGE_INTESTINE	Negative regulation of organelle assembly →	+0.037	+0.146	.006	.005	3	6
LUNG_SCLC	Progesterone biosynthetic process →	-0.170	-0.323	<.001	.008	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,095 associations by consensus.

Regulation of stress fiber assembly by RAPSN expression — OVARY

Explore this box plot interactively →