RAPH1

Across TCGA patient cohorts, RAPH1 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,595 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible RAPH1-associated proteins across cancer lineages are SF3B3, SNRPA1, and CDC73. Each is linked with RAPH1 in more than 3 cancer types. Because this analysis shows association rather than direction, both RAPH1-to-partner and partner-to-RAPH1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAPH1 versus SF3B3 in LSCC, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RAPH1→partner) and Y-score (partner→RAPH1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	SF3B3 →	+0.175	+0.494	.002	<.001	3	4
GBM	SNRPA1 →	+0.195	+0.255	.002	.001	3	4
LSCC	CDC73 →	+0.239	+0.432	.001	<.001	3	4
PDAC	DPY30 →	+0.621	+0.458	<.001	<.001	3	4
LSCC	FMNL1_S184 →	-0.729	-0.443	.004	.002	3	4
LSCC	HNRNPM →	+0.149	+0.445	.003	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,595 associations by consensus.

RAPH1 vs SF3B3 — LSCC

Explore this scatter interactively →