RANGRF

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RANGRF protein abundance is significantly associated with the RNA expression of many other genes, with 6,709 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RANGRF-associated genes across cancer lineages are XBP1, CTSH, and LINC02595. Each is linked with RANGRF in more than 2 cancer types. Because this analysis shows association rather than direction, both RANGRF-to-partner and partner-to-RANGRF results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RANGRF versus XBP1 in UCEC, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RANGRF→partner) and Y-score (partner→RANGRF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECXBP1 →+0.821+0.275<.001.00133
UCECCTSH →+0.762+0.323.001.00133
LUADLINC02595 →-1.251-0.223<.001.00133
COADLINC02285 →+0.426+0.972.001.00533
COADMSR1 →+2.670+1.254<.001.00633
LUADSLC16A6P1 →-0.538-0.273.002<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,709 associations by consensus.

RANGRF vs XBP1 — UCEC

Per-sample scatter of RANGRF vs XBP1 in UCEC (Pearson r = 0.33).

Explore this scatter interactively →

Exploration