RANBP3L

Across TCGA patient cohorts, RANBP3L mutation is significantly associated with the RNA expression of many other genes, with 442 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RANBP3L-associated genes across cancer lineages are SNHG10, SMIM4, and TMEM126A. Each is linked with RANBP3L in more than 1 cancer types. Because this analysis shows association rather than direction, both RANBP3L-to-partner and partner-to-RANBP3L results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNHG10 grouped by RANBP3L-low versus RANBP3L-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RANBP3L→partner) and Y-score (partner→RANBP3L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	SNHG10 →	+0.646	+3.341	.001	.005	3	2
UCEC	SMIM4 →	+0.412	+2.457	.008	.001	3	2
UCEC	TMEM126A →	+0.404	+2.513	.002	.009	3	2
UCEC	SNAPC5 →	+0.343	+3.375	.004	.004	3	2
LUAD	RN7SKP177 →	+0.119	+4.984	<.001	.005	3	2
UCEC	CAPZB →	+0.298	+3.512	.007	.002	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 442 associations by consensus.

SNHG10 by RANBP3L expression — SKCM

Explore this box plot interactively →