RAN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAN protein abundance is significantly associated with the RNA expression of many other genes, with 15,135 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RAN-associated genes across cancer lineages are ZCCHC24, PGAM5, and DDX55. Each is linked with RAN in more than 6 cancer types. Because this analysis shows association rather than direction, both RAN-to-partner and partner-to-RAN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAN versus ZCCHC24 in BRCA, with a Pearson correlation of -0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAN→partner) and Y-score (partner→RAN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAZCCHC24 →-1.112-0.285<.001<.00137
UCECPGAM5 →+0.771+0.176<.001<.00137
UCECDDX55 →+0.701+0.156.001.00136
UCECCDC20 →+1.382+0.102<.001<.00136
LSCCKIF18A →+0.851+0.209<.001<.00136
BRCARAI2 →-1.097-0.182.001.00436
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,135 associations by consensus.

RAN vs ZCCHC24 — BRCA

Per-sample scatter of RAN vs ZCCHC24 in BRCA (Pearson r = -0.40).

Explore this scatter interactively →

Exploration