RADX

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RADX RNA expression is significantly associated with the protein abundance of many other proteins, with 13,525 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RADX-associated proteins across cancer lineages are MAP1B, MAP1B_S541, and PSIP1. Each is linked with RADX in more than 4 cancer types. Because this analysis shows association rather than direction, both RADX-to-partner and partner-to-RADX results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RADX versus MAP1B in LSCC, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RADX→partner) and Y-score (partner→RADX) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMAP1B →+0.656+0.682<.001<.00135
LUADMAP1B_S541 →+0.978+0.455<.001.00835
BRCAPSIP1 →+0.524+0.661.002.00825
UCECPPP1R21 →+0.172+0.594<.001<.00134
LSCCS100P →-1.087-0.681.004.00634
LSCCMAP1B_S91 →+0.766+0.509<.001.00734
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,525 associations by consensus.

RADX vs MAP1B — LSCC

Per-sample scatter of RADX vs MAP1B in LSCC (Pearson r = 0.39).

Explore this scatter interactively →

Exploration