RAD54L2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAD54L2 protein abundance is significantly associated with the RNA expression of many other genes, with 7,770 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RAD54L2-associated genes across cancer lineages are HELLS, CCDC150, and SKA1. Each is linked with RAD54L2 in more than 4 cancer types. Because this analysis shows association rather than direction, both RAD54L2-to-partner and partner-to-RAD54L2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAD54L2 versus HELLS in GBM, with a Pearson correlation of 0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAD54L2→partner) and Y-score (partner→RAD54L2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMHELLS →+0.828+0.366<.001<.00135
UCECCCDC150 →+0.875+0.248<.001<.00135
LSCCSKA1 →+0.869+0.263<.001<.00135
UCECMIR17HG →+0.925+0.270<.001<.00135
UCECCDKN3 →+0.772+0.210.004.00234
GBMNCAPG →+0.837+0.302<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,770 associations by consensus.

RAD54L2 vs HELLS — GBM

Per-sample scatter of RAD54L2 vs HELLS in GBM (Pearson r = 0.35).

Explore this scatter interactively →

Exploration