RAD50

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RAD50 mass-spec protein differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of RAD50’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where RAD50 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types RAD50 is over-expressed in tumor, although a few such as PDAC show the opposite, repressed pattern.

COAD, LSCC, and CCRCC are the cancer types where RAD50 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RAD50 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADMaleIII,IV+0.551<.00111view →
LSCCMaleAll+0.315<.0019view →
CCRCCMaleIII,IV+0.301<.0019view →
LUADMaleIII,IV+0.473<.0018view →
OVAllAll+0.584.0032view →
PDACFemaleIII,IV−0.374.0171view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

RAD50–COAD

Tumor-vs-normal mass-spec protein box plot for RAD50 in COAD.

Open the COAD breakdown →

Exploration