RACGAP1

mutation — cross-omics
Cross-omicsMUTATION → DRUGCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RACGAP1 mutation is significantly associated with the drug of many other genes, with 28 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RACGAP1-associated genes across cancer lineages are Mirin, AGI-6780, and 729189. Each is linked with RACGAP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RACGAP1-to-partner and partner-to-RACGAP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mirin grouped by RACGAP1-low versus RACGAP1-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RACGAP1→partner) and Y-score (partner→RACGAP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEMirin →+0.367+2.868.041.02231
LARGE_INTESTINEAGI-6780 →+0.369+2.868.045.02231
LARGE_INTESTINE729189 →+0.271+2.871.025.02122
LARGE_INTESTINEVenetoclax →+0.377+2.777.019.03831
LARGE_INTESTINEQuizartinib →+0.364+2.874.016.02131
LARGE_INTESTINEIWP-2 →+0.321+3.115.010.01521
Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

Mirin by RACGAP1 expression — LARGE_INTESTINE

Box plot of Mirin in RACGAP1-low vs RACGAP1-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration