RABGAP1L-DT

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RABGAP1L-DT RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of RABGAP1L-DT’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where RABGAP1L-DT RNA is more highly expressed in tumor relative to normal tissue. In most cancer types RABGAP1L-DT is over-expressed in tumor, although a few such as KIRP and KIRC show the opposite, repressed pattern.

HNSC, KIRP, and KIRC are the cancer types where RABGAP1L-DT tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RABGAP1L-DT RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCFemaleIV+0.528<.00112view →
KIRPMaleAll−0.491<.0019view →
KIRCMaleAll−0.428<.0019view →
KICHFemaleII,III,IV−0.608<.0018view →
LUSCMaleAll+0.379<.0016view →
THCAFemaleAll−0.288<.0015view →
LIHCMaleAll+0.275.0015view →
BLCAFemaleIII,IV+0.255.0203view →
ESCAAllII,III,IV+0.454.0212view →
LUADFemaleII,III,IV+0.165.0332view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

Exploration