RABEPK

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RABEPK protein abundance is significantly associated with the RNA expression of many other genes, with 10,671 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible RABEPK-associated genes across cancer lineages are MOCS1, SWI5, and RBM18. Each is linked with RABEPK in more than 3 cancer types. Because this analysis shows association rather than direction, both RABEPK-to-partner and partner-to-RABEPK results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RABEPK versus MOCS1 in COAD, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RABEPK→partner) and Y-score (partner→RABEPK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADMOCS1 →+0.785+0.565.008.00434
UCECSWI5 →+0.499+0.143.002.00234
BRCARBM18 →+0.554+0.206<.001<.00134
HNSCZBTB43 →+0.620+0.201.001.00134
OVMAPKAP1 →+0.479+0.278.001.00534
UCECPSMB7 →+0.626+0.214.003.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,671 associations by consensus.

RABEPK vs MOCS1 — COAD

Per-sample scatter of RABEPK vs MOCS1 in COAD (Pearson r = 0.42).

Explore this scatter interactively →

Exploration