RAB9AP1

Across TCGA patient cohorts, RAB9AP1 RNA expression is significantly associated with the mutation status of many other genes, with 86 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible RAB9AP1-associated genes across cancer lineages are CHRNA4, RBBP8, and SLC35A2. Each is linked with RAB9AP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RAB9AP1-to-partner and partner-to-RAB9AP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CHRNA4 grouped by RAB9AP1-low versus RAB9AP1-high in BRCA.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB9AP1→partner) and Y-score (partner→RAB9AP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	CHRNA4 →	+7.473	+0.029	.007	<.001	3	1
BRCA	RBBP8 →	+7.473	+0.029	.007	<.001	3	1
BRCA	SLC35A2 →	+8.057	+0.039	.005	<.001	3	1
BRCA	JADE3 →	+7.057	+0.023	.009	<.001	3	1
BRCA	VAC14 →	+7.473	+0.029	.007	<.001	3	1
BRCA	CLPTM1 →	+9.057	+0.059	.003	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 86 associations by consensus.

CHRNA4 by RAB9AP1 expression — BRCA

Explore this box plot interactively →