Across TCGA patient cohorts, RAB42 protein abundance is significantly associated with the RNA expression of many other genes, with 7,776 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RAB42-associated genes across cancer lineages are CTSZ, SLC17A9, and SLC15A3. Each is linked with RAB42 in more than 3 cancer types. Because this analysis shows association rather than direction, both RAB42-to-partner and partner-to-RAB42 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB42→partner) and Y-score (partner→RAB42) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	CTSZ →	+0.948	+0.444	<.001	<.001	3	4
LUAD	SLC17A9 →	+0.846	+0.386	<.001	<.001	3	4
LSCC	SLC15A3 →	+0.616	+0.420	<.001	<.001	3	4
LSCC	APOC1 →	+1.166	+0.428	<.001	<.001	3	4
LUAD	DNAJC5B →	+0.679	+0.488	<.001	.001	3	4
GBM	CD300LF →	+0.672	+0.391	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,776 associations by consensus.

Exploration

RAB42 survival (RNA) · tumor vs normal (RNA) · all RAB42 data types