RAB2B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB2B mutation is significantly associated with the RNA expression of many other genes, with 96 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RAB2B-associated genes across cancer lineages are PHKG1P1, RNA5SP517, and MIR6766. Each is linked with RAB2B in more than 1 cancer types. Because this analysis shows association rather than direction, both RAB2B-to-partner and partner-to-RAB2B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PHKG1P1 grouped by RAB2B-low versus RAB2B-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB2B→partner) and Y-score (partner→RAB2B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCPHKG1P1 →+0.052+5.144<.001.00332
BLCARNA5SP517 →+0.263+7.640<.001.00932
UCECMIR6766 →+0.415+3.358<.001.00631
UCECRNA5SP412 →+1.212+3.289<.001.00131
LUADMIR489 →+0.406+7.930<.001.00831
BLCAMIR8485 →+0.326+7.640<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 96 associations by consensus.

PHKG1P1 by RAB2B expression — CESC

Box plot of PHKG1P1 in RAB2B-low vs RAB2B-high samples in CESC.

Explore this box plot interactively →

Exploration