RAB2B

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB2B mutation is significantly associated with the immune_cell of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RAB2B-associated genes across cancer lineages are NK cells, Fibroblasts, and Endothelial cells. Each is linked with RAB2B in more than 1 cancer types. Because this analysis shows association rather than direction, both RAB2B-to-partner and partner-to-RAB2B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NK cells grouped by RAB2B-low versus RAB2B-high in STAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB2B→partner) and Y-score (partner→RAB2B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADNK cells →+0.006+5.597<.001.04031
CESCFibroblasts →+0.016+5.144<.001.00331
UCECEndothelial cells →-0.050-2.957.024.03711
UCEClymphatic Endothelial cells →-0.028-2.946.040.03711
UCECmv Endothelial cells →-0.034-2.989.012.03711
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

NK cells by RAB2B expression — STAD

Box plot of NK cells in RAB2B-low vs RAB2B-high samples in STAD.

Explore this box plot interactively →

Exploration