RAB23

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RAB23 mutation is significantly associated with the RNA expression of many other genes, with 1 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RAB23-associated genes across cancer lineages are KRTAP12-3. Each is linked with RAB23 in more than 1 cancer types. Because this analysis shows association rather than direction, both RAB23-to-partner and partner-to-RAB23 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KRTAP12-3 grouped by RAB23-low versus RAB23-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB23→partner) and Y-score (partner→RAB23) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEKRTAP12-3 →+0.043+4.022<.001.00631
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

KRTAP12-3 by RAB23 expression — LARGE_INTESTINE

Box plot of KRTAP12-3 in RAB23-low vs RAB23-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration