RAB20

Across TCGA patient cohorts, RAB20 protein abundance is significantly associated with the RNA expression of many other genes, with 10,253 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RAB20-associated genes across cancer lineages are TM9SF2, NAXD, and KIF3C. Each is linked with RAB20 in more than 3 cancer types. Because this analysis shows association rather than direction, both RAB20-to-partner and partner-to-RAB20 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB20 versus TM9SF2 in OV, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB20→partner) and Y-score (partner→RAB20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	TM9SF2 →	+0.643	+0.443	.003	.002	3	4
BRCA	NAXD →	+0.703	+0.500	<.001	<.001	3	4
UCEC	KIF3C →	-0.705	-0.361	.001	.002	3	4
OV	CARS2 →	+0.486	+0.499	<.001	<.001	3	3
OV	BRSK1 →	-0.937	-0.410	.001	.001	3	3
LSCC	ZNF658 →	-0.517	-0.255	<.001	.002	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,253 associations by consensus.

RAB20 vs TM9SF2 — OV

Explore this scatter interactively →