R3HDM2P1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, R3HDM2P1 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,053 significant associations in total. GBM shows the largest number of these associations.

The most reproducible R3HDM2P1-associated proteins across cancer lineages are HDLBP_S944, PTPN2, and NES_S548. Each is linked with R3HDM2P1 in more than 2 cancer types. Because this analysis shows association rather than direction, both R3HDM2P1-to-partner and partner-to-R3HDM2P1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, R3HDM2P1 versus HDLBP_S944 in GBM, with a Pearson correlation of -0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (R3HDM2P1→partner) and Y-score (partner→R3HDM2P1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMHDLBP_S944 →-0.643-0.812<.001<.00133
GBMPTPN2 →-0.271-0.833<.001<.00133
GBMNES_S548 →-0.601-0.843<.001<.00132
GBMPARM1 →+0.727+0.651<.001.00132
UCECPSMD1_T311 →-0.455-0.366<.001.00832
GBMPSMD14 →-0.166-0.814.002<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,053 associations by consensus.

R3HDM2P1 vs HDLBP_S944 — GBM

Per-sample scatter of R3HDM2P1 vs HDLBP_S944 in GBM (Pearson r = -0.34).

Explore this scatter interactively →

Exploration