R3HDM1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, R3HDM1 protein abundance is significantly associated with the RNA expression of many other genes, with 8,856 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible R3HDM1-associated genes across cancer lineages are POLR2D, TSN, and PSMD14. Each is linked with R3HDM1 in more than 3 cancer types. Because this analysis shows association rather than direction, both R3HDM1-to-partner and partner-to-R3HDM1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, R3HDM1 versus POLR2D in OV, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (R3HDM1→partner) and Y-score (partner→R3HDM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPOLR2D →+0.623+0.457<.001.00134
LSCCTSN →+0.500+0.233<.001<.00134
LSCCPSMD14 →+0.633+0.267<.001<.00134
GBMHJURP →+1.027+0.304<.001<.00134
LSCCNUF2 →+1.096+0.268<.001<.00134
GBMCDC25A →+0.936+0.305<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,856 associations by consensus.

R3HDM1 vs POLR2D — OV

Per-sample scatter of R3HDM1 vs POLR2D in OV (Pearson r = 0.40).

Explore this scatter interactively →

Exploration