PYCR1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PYCR1 mutation is significantly associated with the total protein of many other genes, with 15 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PYCR1-associated genes across cancer lineages are EGFR_pY1068, eIF4E, and ERK2. Each is linked with PYCR1 in more than 1 cancer types. Because this analysis shows association rather than direction, both PYCR1-to-partner and partner-to-PYCR1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by PYCR1-low versus PYCR1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PYCR1→partner) and Y-score (partner→PYCR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.266-2.459.028.02031
UCECeIF4E →+0.228+2.321.025.03431
UCECERK2 →+0.294+3.584.001.00231
UCECMEK1 →+0.368+3.169.037.01931
UCECPCNA →+0.266+2.459.010.02031
UCECAnnexin-1 →+0.771+3.189.002.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

EGFR_pY1068 by PYCR1 expression — UCEC

Box plot of EGFR_pY1068 in PYCR1-low vs PYCR1-high samples in UCEC.

Explore this box plot interactively →

Exploration