PXK

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PXK protein abundance is significantly associated with the RNA expression of many other genes, with 15,385 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PXK-associated genes across cancer lineages are ASPA, ZEB2, and MILR1. Each is linked with PXK in more than 5 cancer types. Because this analysis shows association rather than direction, both PXK-to-partner and partner-to-PXK results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PXK versus ASPA in GBM, with a Pearson correlation of 0.48.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PXK→partner) and Y-score (partner→PXK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMASPA →+1.042+0.336.004<.00136
BRCAZEB2 →+0.789+0.252<.001<.00136
OVMILR1 →+1.069+0.458.003.00436
HNSCCXCL12 →+1.104+0.192<.001<.00136
GBMATP8B4 →+0.976+0.352<.001<.00136
HNSCFLI1 →+0.748+0.247<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,385 associations by consensus.

PXK vs ASPA — GBM

Per-sample scatter of PXK vs ASPA in GBM (Pearson r = 0.48).

Explore this scatter interactively →

Exploration