PUM1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PUM1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,975 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PUM1-associated GO terms across cancer lineages are Regulation of DNA-templated transcription initiation, Epigenetic regulation of gene expression, and Regulation of transcription initiation by RNA polymerase II. Each is linked with PUM1 in more than 17 cancer types. Because this analysis shows association rather than direction, both PUM1-to-partner and partner-to-PUM1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA-templated transcription initiation grouped by PUM1-low versus PUM1-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PUM1→partner) and Y-score (partner→PUM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCRegulation of DNA-templated transcription initiation →+0.066+0.635<.001<.001318
BONEEpigenetic regulation of gene expression →+0.092+0.970<.001<.001318
UPPER_AERODIGESTIVE_TRACTRegulation of transcription initiation by RNA polymerase II →+0.062+0.855<.001<.001318
BONEHeterochromatin formation →+0.077+0.987.004<.001218
BONENegative regulation of gene expression, epigenetic →+0.085+1.034.001<.001317
BONENucleic acid transport →+0.134+1.019<.001<.001317
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,975 associations by consensus.

Regulation of DNA-templated transcription initiation by PUM1 expression — LUNG_SCLC

Box plot of Regulation of DNA-templated transcription initiation in PUM1-low vs PUM1-high samples in LUNG_SCLC.

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Exploration