PUDP

Across TCGA patient cohorts, PUDP protein abundance is significantly associated with the RNA expression of many other genes, with 8,687 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible PUDP-associated genes across cancer lineages are ARSD, PNPLA4, and KDM6A. Each is linked with PUDP in more than 6 cancer types. Because this analysis shows association rather than direction, both PUDP-to-partner and partner-to-PUDP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PUDP versus ARSD in LUAD, with a Pearson correlation of 0.56.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PUDP→partner) and Y-score (partner→PUDP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	ARSD →	+0.921	+0.536	<.001	<.001	3	7
BRCA	PNPLA4 →	+0.718	+0.451	.005	<.001	3	7
LUAD	KDM6A →	+0.447	+0.488	<.001	<.001	3	7
CCRCC	XIST →	+3.264	+0.331	<.001	<.001	3	7
LUAD	TPX2 →	-1.203	-0.568	<.001	<.001	3	7
LUAD	USP9Y →	-2.735	-0.604	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,687 associations by consensus.

PUDP vs ARSD — LUAD

Explore this scatter interactively →