PUDP

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PUDP mutation is significantly associated with the total protein of many other genes, with 31 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PUDP-associated genes across cancer lineages are Shc_pY317, c-Jun_pS73, and 14-3-3_beta. Each is linked with PUDP in more than 1 cancer types. Because this analysis shows association rather than direction, both PUDP-to-partner and partner-to-PUDP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Shc_pY317 grouped by PUDP-low versus PUDP-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PUDP→partner) and Y-score (partner→PUDP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECShc_pY317 →-0.172-2.584.006.01032
UCECc-Jun_pS73 →-0.177-3.446.006.00532
UCEC14-3-3_beta →-0.085-3.143.039.01831
UCECEGFR_pY1068 →-0.274-3.000.008.00131
UCECFOXO3a_pS318_S321 →-0.116-2.105.024.01731
UCECFOXO3a →-0.089-1.794.034.02731
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

Shc_pY317 by PUDP expression — UCEC

Box plot of Shc_pY317 in PUDP-low vs PUDP-high samples in UCEC.

Explore this box plot interactively →

Exploration