PTX4

Across TCGA cell cohorts, PTX4 RNA expression is significantly associated with the RNA expression of many other genes, with 4,482 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible PTX4-associated genes across cancer lineages are E4F1, CRAMP1, and SETD1A. Each is linked with PTX4 in more than 6 cancer types. Because this analysis shows association rather than direction, both PTX4-to-partner and partner-to-PTX4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PTX4 versus E4F1 in SKIN, with a Pearson correlation of 0.39.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PTX4→partner) and Y-score (partner→PTX4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKIN	E4F1 →	+0.901	+0.061	<.001	.002	3	7
BLOOD_Lymphoma	CRAMP1 →	+1.071	+0.039	<.001	<.001	3	6
BLOOD_Lymphoma	SETD1A →	+0.985	+0.063	<.001	.001	3	6
BREAST	TAOK2 →	+0.744	+0.082	<.001	.007	2	6
BREAST	RPUSD1 →	+0.976	+0.111	<.001	<.001	1	7
URINARY_TRACT	PKD1 →	+1.431	+0.044	<.001	.002	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,482 associations by consensus.

PTX4 vs E4F1 — SKIN

Explore this scatter interactively →