Across TCGA cell cohorts, PTPRT RNA expression is significantly associated with the go_rna of many other GO terms, with 609 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible PTPRT-associated GO terms across cancer lineages are Regulation of cytoplasmic translation, Olfactory placode formation, and Positive regulation of glycogen metabolic process. Each is linked with PTPRT in more than 3 cancer types. Because this analysis shows association rather than direction, both PTPRT-to-partner and partner-to-PTPRT results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PTPRT→partner) and Y-score (partner→PTPRT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SOFT_TISSUE	Regulation of cytoplasmic translation →	+0.067	+0.724	<.001	.008	3	4
SOFT_TISSUE	Olfactory placode formation →	+0.565	+0.505	.009	.008	3	4
SOFT_TISSUE	Positive regulation of glycogen metabolic process →	+0.088	+0.730	<.001	.007	3	4
SOFT_TISSUE	Olfactory placode development →	+0.565	+0.505	.009	.008	3	4
SOFT_TISSUE	Olfactory placode morphogenesis →	+0.565	+0.505	.009	.008	3	4
SOFT_TISSUE	Import across plasma membrane →	-0.043	-0.723	<.001	.008	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 609 associations by consensus.

Exploration

PTPRT survival (RNA) · tumor vs normal (RNA) · all PTPRT data types