Across TCGA patient cohorts, PTPRCAP RNA expression is significantly associated with the go_rna of many other GO terms, with 1,854 significant associations in total. SCLC shows the largest number of these associations.

The most reproducible PTPRCAP-associated GO terms across cancer lineages are Response to selenium ion, Regulation of hydrogen peroxide metabolic process, and Membrane invagination. Each is linked with PTPRCAP in more than 1 cancer types. Because this analysis shows association rather than direction, both PTPRCAP-to-partner and partner-to-PTPRCAP results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PTPRCAP→partner) and Y-score (partner→PTPRCAP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SCLC	Response to selenium ion →	+0.199	+1.986	<.001	<.001	3	1
SCLC	Regulation of hydrogen peroxide metabolic process →	+0.158	+1.203	<.001	<.001	3	1
SCLC	Membrane invagination →	+0.160	+1.723	<.001	<.001	3	1
SCLC	Response to gamma radiation →	+0.092	+1.565	<.001	<.001	3	1
SCLC	Negative regulation of peptidase activity →	+0.097	+1.432	<.001	<.001	3	1
SCLC	Regulation of gastrulation →	-0.092	-1.312	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,854 associations by consensus.

Exploration

PTPRCAP survival (RNA) · tumor vs normal (RNA) · all PTPRCAP data types