Across TCGA patient cohorts, PTPN2P2 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,987 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PTPN2P2-associated proteins across cancer lineages are CTBP1, HSP90AB1_S226, and MTFR1L. Each is linked with PTPN2P2 in more than 3 cancer types. Because this analysis shows association rather than direction, both PTPN2P2-to-partner and partner-to-PTPN2P2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PTPN2P2→partner) and Y-score (partner→PTPN2P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	CTBP1 →	+0.299	+0.818	<.001	<.001	3	4
OV	HSP90AB1_S226 →	-1.043	-0.635	<.001	<.001	3	4
HNSC	MTFR1L →	+0.221	+0.774	.005	<.001	3	3
GBM	SP4_S46 →	+0.632	+0.833	<.001	<.001	3	3
BRCA	TPRN_S241 →	-0.442	-0.309	<.001	<.001	3	3
OV	WASHC2A_S230 →	-3.368	-0.974	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,987 associations by consensus.

Exploration

PTPN2P2 survival (RNA) · tumor vs normal (RNA) · all PTPN2P2 data types