PTGIS

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PTGIS mutation is significantly associated with the RNA expression of many other genes, with 3,114 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PTGIS-associated genes across cancer lineages are GUF1, SNX7, and H2AZ1. Each is linked with PTGIS in more than 1 cancer types. Because this analysis shows association rather than direction, both PTGIS-to-partner and partner-to-PTGIS results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GUF1 grouped by PTGIS-low versus PTGIS-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PTGIS→partner) and Y-score (partner→PTGIS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGUF1 →+0.483+2.246<.001.00532
UCECSNX7 →+0.730+3.716.002<.00132
UCECH2AZ1 →+0.664+3.823<.001<.00132
UCECKCNK5 →-1.108-2.715<.001<.00132
UCECR3HCC1L →+0.372+2.708.006.00332
UCECADAMTS15 →-1.403-3.967<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,114 associations by consensus.

GUF1 by PTGIS expression — UCEC

Box plot of GUF1 in PTGIS-low vs PTGIS-high samples in UCEC.

Explore this box plot interactively →

Exploration