PTGFR

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PTGFR mutation is significantly associated with the total protein of many other genes, with 28 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PTGFR-associated genes across cancer lineages are Caspase-8, Cyclin-B1, and FoxM1. Each is linked with PTGFR in more than 2 cancer types. Because this analysis shows association rather than direction, both PTGFR-to-partner and partner-to-PTGFR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-8 grouped by PTGFR-low versus PTGFR-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PTGFR→partner) and Y-score (partner→PTGFR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-8 →-0.180-3.558.042.00232
SKCMCyclin-B1 →+0.570+3.087<.001<.00123
SKCMFoxM1 →+0.252+2.321.002.03232
SKCMACC1 →+0.341+2.321.005.03232
SKCMKu80 →+0.288+1.906.009.01632
SKCMSTAT3_pY705 →-0.247-2.584.022.01032
Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

Caspase-8 by PTGFR expression — UCEC

Box plot of Caspase-8 in PTGFR-low vs PTGFR-high samples in UCEC.

Explore this box plot interactively →

Exploration