PTCRA

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PTCRA mutation is significantly associated with the immune_cell of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PTCRA-associated genes across cancer lineages are lymphatic Endothelial cells, Neutrophils, and Endothelial cells. Each is linked with PTCRA in more than 1 cancer types. Because this analysis shows association rather than direction, both PTCRA-to-partner and partner-to-PTCRA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, lymphatic Endothelial cells grouped by PTCRA-low versus PTCRA-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PTCRA→partner) and Y-score (partner→PTCRA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEClymphatic Endothelial cells →-0.024-3.138.045.01931
UCECNeutrophils →+0.015+1.681.001.04931
UCECEndothelial cells →-0.042-3.416.028.00511
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

lymphatic Endothelial cells by PTCRA expression — UCEC

Box plot of lymphatic Endothelial cells in PTCRA-low vs PTCRA-high samples in UCEC.

Explore this box plot interactively →

Exploration