PTCHD3P2

Across TCGA patient cohorts, PTCHD3P2 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,730 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PTCHD3P2-associated proteins across cancer lineages are YTHDC1, RPRD2, and SMC1A. Each is linked with PTCHD3P2 in more than 4 cancer types. Because this analysis shows association rather than direction, both PTCHD3P2-to-partner and partner-to-PTCHD3P2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PTCHD3P2 versus YTHDC1 in GBM, with a Pearson correlation of 0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PTCHD3P2→partner) and Y-score (partner→PTCHD3P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	YTHDC1 →	+0.288	+0.486	<.001	.001	3	5
HNSC	RPRD2 →	+0.284	+0.461	<.001	<.001	3	5
GBM	SMC1A →	+0.358	+0.648	<.001	<.001	3	5
GBM	TYMP →	-0.615	-0.586	<.001	<.001	3	5
GBM	UBTF →	+0.380	+0.678	<.001	<.001	3	5
GBM	PSIP1 →	+0.658	+0.797	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,730 associations by consensus.

PTCHD3P2 vs YTHDC1 — GBM

Explore this scatter interactively →