PTBP3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PTBP3 protein abundance is significantly associated with the RNA expression of many other genes, with 12,279 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PTBP3-associated genes across cancer lineages are TXN, MFSD14B, and RNA5SP295. Each is linked with PTBP3 in more than 6 cancer types. Because this analysis shows association rather than direction, both PTBP3-to-partner and partner-to-PTBP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PTBP3 versus TXN in LSCC, with a Pearson correlation of 0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PTBP3→partner) and Y-score (partner→PTBP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCTXN →+0.937+0.181<.001<.00137
OVMFSD14B →+0.599+0.307<.001<.00136
UCECRNA5SP295 →+1.081+0.200.001.00236
HNSCRAD23B →+0.580+0.257<.001<.00135
OVABITRAM →+0.759+0.297<.001.00235
OVRAB14 →+0.563+0.311<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,279 associations by consensus.

PTBP3 vs TXN — LSCC

Per-sample scatter of PTBP3 vs TXN in LSCC (Pearson r = 0.49).

Explore this scatter interactively →

Exploration