PSPC1-AS2

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, PSPC1-AS2 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of PSPC1-AS2’s most consistent transcriptional readouts.

The strongest signal is observed in stomach adenocarcinoma (STAD), where PSPC1-AS2 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types PSPC1-AS2 is over-expressed in tumor, although a few such as LUAD and KICH show the opposite, repressed pattern.

STAD, HNSC, and LIHC are the cancer types where PSPC1-AS2 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in PSPC1-AS2 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
STADAllII,III,IV+0.735<.0018view →
HNSCAllAll+0.240.0047view →
LIHCMaleAll+0.426<.0016view →
CHOLAllAll+1.222<.0015view →
BLCAAllAll+0.547.0154view →
COADAllII,III,IV+0.371.0124view →
READAllAll+0.857.0182view →
ESCAAllAll+0.687.0191view →
LUADFemaleIII,IV−0.556.0331view →
KICHAllAll−0.347.0051view →
KIRCFemaleAll+0.294.0251view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

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