PSME3IP1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PSME3IP1 mutation is significantly associated with the RNA expression of many other genes, with 1,036 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PSME3IP1-associated genes across cancer lineages are RN7SL504P, CRYAA2, and RNU6-546P. Each is linked with PSME3IP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both PSME3IP1-to-partner and partner-to-PSME3IP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL504P grouped by PSME3IP1-low versus PSME3IP1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PSME3IP1→partner) and Y-score (partner→PSME3IP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SL504P →+0.087+2.912.004.00932
SKCMCRYAA2 →+0.297+5.075<.001.00131
BRCARNU6-546P →+0.323+8.471<.001.00531
SKCMCFL1P8 →+0.101+4.500.008.00531
SKCMEI24P1 →+0.056+4.913<.001.00231
SKCMRPL30P12 →+0.133+4.241.004.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,036 associations by consensus.

RN7SL504P by PSME3IP1 expression — UCEC

Box plot of RN7SL504P in PSME3IP1-low vs PSME3IP1-high samples in UCEC.

Explore this box plot interactively →

Exploration