PSMD9

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PSMD9 mutation is significantly associated with the total protein of many other genes, with 8 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PSMD9-associated genes across cancer lineages are Annexin-1, TFRC, and 4E-BP1_pT37_T46. Each is linked with PSMD9 in more than 1 cancer types. Because this analysis shows association rather than direction, both PSMD9-to-partner and partner-to-PSMD9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Annexin-1 grouped by PSMD9-low versus PSMD9-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PSMD9→partner) and Y-score (partner→PSMD9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECAnnexin-1 →+0.737+2.827.015.03531
UCECTFRC →+0.644+3.000.036.03731
UCEC4E-BP1_pT37_T46 →-0.528-3.000.014.03631
UCECMyosin-IIa_pS1943 →+0.280+3.013.019.01921
UCECp21 →+0.323+3.000.003.03711
UCECp62 Lck ligand →+0.399+3.000.034.03711
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

Annexin-1 by PSMD9 expression — UCEC

Box plot of Annexin-1 in PSMD9-low vs PSMD9-high samples in UCEC.

Explore this box plot interactively →

Exploration