PSMC6

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, PSMC6 mass-spec protein differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of PSMC6’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where PSMC6 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types PSMC6 is over-expressed in tumor, although a few such as HNSC show the opposite, repressed pattern.

CCRCC, COAD, and LUAD are the cancer types where PSMC6 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in PSMC6 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCFemaleAll+0.139<.00111view →
COADMaleAll+0.221<.0019view →
LUADFemaleII,III,IV+0.182<.0019view →
LSCCMaleII,III,IV+0.205<.0017view →
HNSCMaleAll−0.121<.0017view →
PDACMaleAll+0.335<.0014view →
OVAllAll+0.221<.0012view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

PSMC6–CCRCC

Tumor-vs-normal mass-spec protein box plot for PSMC6 in CCRCC.

Open the CCRCC breakdown →

Exploration