PSMC4

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, PSMC4 mass-spec protein differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of PSMC4’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where PSMC4 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types PSMC4 is over-expressed in tumor, although a few such as HNSC show the opposite, repressed pattern.

CCRCC, LUAD, and COAD are the cancer types where PSMC4 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in PSMC4 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCAllIII,IV+0.116<.00110view →
LUADMaleII,III,IV+0.320<.0019view →
COADFemaleIII,IV+0.282<.0019view →
LSCCMaleII,III,IV+0.301<.0018view →
HNSCMaleAll−0.083.0014view →
OVAllAll+0.358<.0012view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

PSMC4–CCRCC

Tumor-vs-normal mass-spec protein box plot for PSMC4 in CCRCC.

Open the CCRCC breakdown →

Exploration