PSMC4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PSMC4 mutation is significantly associated with the total protein of many other genes, with 28 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PSMC4-associated genes across cancer lineages are STAT5a, Cyclin-B1, and 14-3-3_beta. Each is linked with PSMC4 in more than 1 cancer types. Because this analysis shows association rather than direction, both PSMC4-to-partner and partner-to-PSMC4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, STAT5a grouped by PSMC4-low versus PSMC4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PSMC4→partner) and Y-score (partner→PSMC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSTAT5a →+0.308+1.874.040.04932
UCECCyclin-B1 →+0.442+1.765.036.01432
UCEC14-3-3_beta →-0.087-1.847.021.04931
UCECA-Raf_pS299 →-0.144-2.115.001.01731
UCECERK2 →+0.270+2.662<.001<.00131
UCECAcetyl-a-Tubulin-Lys40 →+0.433+1.710.023.02531
Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

STAT5a by PSMC4 expression — UCEC

Box plot of STAT5a in PSMC4-low vs PSMC4-high samples in UCEC.

Explore this box plot interactively →

Exploration