PSMC1P1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PSMC1P1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,010 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible PSMC1P1-associated GO terms across cancer lineages are Ribosomal small subunit export from nucleus, Transcription by RNA polymerase III, and Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Each is linked with PSMC1P1 in more than 27 cancer types. Because this analysis shows association rather than direction, both PSMC1P1-to-partner and partner-to-PSMC1P1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ribosomal small subunit export from nucleus grouped by PSMC1P1-low versus PSMC1P1-high in UVM.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PSMC1P1→partner) and Y-score (partner→PSMC1P1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UVMRibosomal small subunit export from nucleus →+0.057+0.353<.001<.001328
UVMTranscription by RNA polymerase III →+0.040+0.350<.001<.001327
UVMMaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →+0.043+0.378<.001<.001327
UVMRegulation of translational initiation →+0.053+0.357<.001<.001326
UVMMaturation of SSU-rRNA →+0.049+0.370<.001<.001326
THYMPositive regulation of mRNA processing →+0.070+0.521<.001<.001326
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,010 associations by consensus.

Ribosomal small subunit export from nucleus by PSMC1P1 expression — UVM

Box plot of Ribosomal small subunit export from nucleus in PSMC1P1-low vs PSMC1P1-high samples in UVM.

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Exploration