PSMC1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PSMC1 mutation is significantly associated with the total protein of many other genes, with 6 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PSMC1-associated genes across cancer lineages are PRAS40_pT246, Bak, and CD31. Each is linked with PSMC1 in more than 1 cancer types. Because this analysis shows association rather than direction, both PSMC1-to-partner and partner-to-PSMC1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRAS40_pT246 grouped by PSMC1-low versus PSMC1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PSMC1→partner) and Y-score (partner→PSMC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPRAS40_pT246 →+0.217+2.321.008.03431
UCECBak →+0.272+2.999.024.03531
UCECCD31 →-0.163-3.311.022.01031
UCEC53BP1 →+0.339+2.459.040.02031
UCEC14-3-3_beta →-0.124-3.149.010.01921
UCECP-Cadherin →-0.184-2.446.008.02021
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

PRAS40_pT246 by PSMC1 expression — UCEC

Box plot of PRAS40_pT246 in PSMC1-low vs PSMC1-high samples in UCEC.

Explore this box plot interactively →

Exploration